学术论文
2015年以来的主要学术论文与专著
1.Q. She. 2021. Antiviral defense mechanisms in Archaea. InEncyclopedia of Virology 4th edition. Editors in Chief: Dennis Bamford and Mark Zuckerman. Volume 4: Viruses as Infectious Agents: Bacterial, Archaeal, Fungal, Algal, and Invertebrate Viruses, pp.400-406. Academic Press 2021（专著）
2.J. Lin, Y. Shen, J. Ni,Q. She.2021. A type III-A CRISPR-Cas system mediates co-transcriptional DNA cleavage at the transcriptional bubbles in close proximity to active effectors.Nucleic Acids Res. 49, 7628-7643.
3. N. Sofos, M. Feng, S. Stella, T. Pape, A. Fuglsang, J. Lin, Q. Huang, Y. Li,Q. She, G. Montoya. 2020. Structures of the Cmr-Beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas."Mol Cell79,741-57 e7.
4. X. Feng, X. Liu, R. Xu, R. Zhao, W. Feng, J. Liao, W. Han,Q. She. 2020. A Unique B-Family DNA Polymerase Facilitating Error-Prone DNA Damage Tolerance in Crenarchaeota.Front Microbiol11 (2020): 1585.
5. J. Lin, M. Feng, H. Zhang,Q. She. 2020.Characterization of a novel type III CRISPR-Cas effector provides new insights into the allosteric activation and suppression of the Cas10 DNase.Cell Discovery,6,29, https://doi.org/10.1038/s41421-020-0160-4.
6.R. Molina, S. Stella, M. Feng, N. Sofos, V. Jauniskis, I. Pozdnyakova, B. López-Méndez,Q. She and G. Montoya. 2019. Structure of Csx1-cOA4 complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.Nat Commun. 2019.10, 4302. doi: 10.1038/s41467-019-12244-z.
7.X. Feng, Q. Huang, and Q. She*.2019. Crenarchaeal 3D genome: A prototypical chromosome architecture for eukaryotes.Cell 179,56-58. doi: 10.1016/j.cell.2019.08.045
8. M. S. Donia, Q. She, J.A. Huber and H. Jia. 2019. Cell LeadingEdge Voices: Creating a Unique Culture.Cell 177,1368-1369. doi: 10.1016/j.cell.2019.05.014 (Voice piece by QS “Empathy as a solution”)
9. T. Guo, W. Han*, Q. She*. 2019. Tolerance of Sulfolobus SMV1 virus to the immunity of I-A and III-B CRISPR-Cas systems in Sulfolobus islandicus.RNA Biol16,549-556. doi: 10.1080/15476286.2018.1460993.
10. W. Han, S. Stella, Y. Zhang, T. Guo, K. Sulek, L. Lundgren, G. Montoya, Q. She*. 2018. A Type III-B Cmr effector complex catalyzes the synthesis of cyclic oligoadenylate second messengers by cooperative substrate binding.Nucleic Acids Res.46,10319-10330.
11. M. Sun, X. Feng, Z. Liu, W. Han, Y. X. Liang*, Q. She*. 2018. An Orc1/Cdc6 ortholog functions as a key regulator in the regulatory network of DNA damage response in an archaeon.Nucleic Acids Res.46,6697-6711.
12. X. Feng, M. Sun, W. Han, Y. X. Liang, Q. She*. 2018. transcriptional factor B paralog functions as an activator to DNA damage-responsive expression in archaea.Nucleic Acids Res.46,7085-7096.
13. W. Han, S. Pan, B. López-Méndez, G. Montoya and Q. She*. 2017. Allosteric regulation of Csx1, a type IIIB-associated CARF domain ribonuclease by RNAs carrying a tetraadenylate tail.Nucleic Acids Res.45,10740-10750.
14. Y. Li, Y. Zhang, J. Lin, S. Pan, W. Han, N. Peng, Y. X. Liang, Q. She*. 2017. Cmr1 enables efficient RNA and DNA interference of a III-B CRISPR-Cas system by binding to target RNA and crRNA.Nucleic Acids Res. 45, 11305-11314.
15. T. Liu, Z. Liu, Q. Ye, S. Pan, X. Wang, W. Peng, Y. Li, X. Y. Liang, Q. She, N. Peng. 2017. Coupling transcriptional activation of CRISPR-Cas system and DNA repair genes by Csa3a in Sulfolobus islandicus.Nucleic Acids Res. 45, 8978-8992.
16. W. Han, Y. Xu, X. Feng, Y. X. Liang, L. Huang, Y. Shen. Q. She*. 2017. NQO-induced DNA-less cell formation is associated with chromatin protein degradation and dependent on A0A1-ATPase in Sulfolobus. Front Microbiol. doi:10.3389/fmicb.2017.01480
17. N. Peng, W. Han, Y. Li, Y. X. Liang, Q. She*. 2017.Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea. Sci China Life Sci. 60, 370-385.
18. W. Han, L. Deng, M. Feng, W. Peng, S. Hallstrøm, Y. X. Liang, M. F. White, Q. She*. 2017. A type III-B CRISPR–Cas effector complex mediating massive target DNA destruction by modulating the cognate RNA cleavage. Nucleic Acids Res. 28, 1983-1993.
19. F. He, G. Vestergaard, W. Peng, Q. She, X. Peng. 2017. CRISPR-Cas type I-A Cascade complex couples viral infection surveillance to host transcriptional regulation.Nucleic Acids Res. 45, 1902-1913.
20. Q. She*, X. Feng and W. Han. 2017. Archaeal DNA damage repair. In Communication of Archaea, (G. Witzany, ed. 2017) pp305-318. Springer Publisher （专著）
21. Y. Li, S. Pan, Y. Zhang, M. Ren, M. Feng, N. Peng, L. Chen, Y. X. Liang*, Q. She*. 2016. Harnessing Type I and Type III CRISPR-Cas systems for genome editing. Nucleic Acids Res. 44, e34.
22. H. Wang, N. Peng, S. A. Shah, L. Huang*, Q. She*. 2015. Archaeal Extrachromosomal Genetic Elements.Microbiol. Mol. Biol. Rev.79,117-152. doi: 10.1128/MMBR.00042-14.
23. W. Peng, M. Feng, X. Feng, X. Y. Liang, Q. She*. 2015. An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference. Nucleic Acids Res. 43, 406-417.
24. T. Liu, Y. Li, X. Wang, Q. Ye, H. Li, Y. X. Liang, Q. She, N. Peng. 2015. Transcriptional regulator-mediated activation of adaptation genes triggers CRISPR de novo spacer acquisition.Nucleic Acids Res. 43, 1044-1055.
25. S. Fusco S, Q. She, G. Fiorentino, S. Bartolucci, P. Contursi. 2015. Unravelling the role of the F55 regulator in the transition from lysogeny to UV induction of Sulfolobus spindle-shaped virus 1. J. Virol. 89, 6453-6461.
